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Download citations for all displayed entries in BibTeX format| Entry ID | Original Release date | Data summary | Entry Title | Citation Title | Authors |
|---|---|---|---|---|---|
| 31171 | 2024-11-21 | Chemical Shifts: 1 set |
Structure of West Nile Virus 3'- stem-loop_68NTS |
Structure of Essential RNA Regulatory Elements in the West Nile Virus 3'-Terminal Stem Loop
|
Bhawna Chaubey, Gabriele Varani, Gregory L Olsen, Ying Zhu |
| 31165 | 2024-11-21 | Chemical Shifts: 1 set |
Structure of West Nile Virus 3'- stem-loop_50NTS |
Structure of Essential RNA Regulatory Elements in the West Nile Virus 3'-Terminal Stem Loop
|
Bhawna Chaubey, Gabriele Varani, Gregory L Olsen, Ying Zhu |
| 51127 | 2022-10-05 | Chemical Shifts: 1 set |
A functional SNP regulates E-cadherin expression by dynamically remodeling the 3D structure of a promoter-associated non-coding RNA transcript |
A functional SNP regulates E-cadherin expression by dynamically remodeling the 3D structure of a promoter-associated non-coding RNA transcript
|
Carlo V Catapano, Gabriele Varani, Giuseppina Pisignano, Jessica Merulla, Shrikant Sharma |
| 28094 | 2020-08-18 | Chemical Shifts: 1 set |
Solution NMR structure of 5'UTR of Stem loop B in DENV4 |
NMR structure of Dengue West Nile viruses stem-loop B: A key cis-acting element for flavivirus replication
|
Gabriele Varani, Shrikant Sharma |
| 27873 | 2019-05-09 | Chemical Shifts: 2 sets Coupling Constants: 1 set Homonuclear NOE Values: 1 set |
Solution structure of an alpha sheet hairpin peptide |
alpha-Sheet secondary structure in amyloid beta-peptide drives aggregation and toxicity in Alzheimer's disease
|
Cheng-Chieh C Hsu, Christopher D Link, Colson P Tomberlin, Daniel Paris, Dylan Shea, Gabriele Varani, Jeffrey Zonderman, Joshua Cochran, Libo Wang, Matthew Carter C Childers, Mike Mullan, Natasha Paranjapye, Timothy M Bi, Valerie Daggett |
| 30486 | 2019-05-07 | Chemical Shifts: 1 set |
Solution structure of Rbfox2 RRM mimetic peptide CPfox2 |
A Small Cyclic beta-Hairpin Peptide Mimics the Rbfox2 RNA Recognition Motif and Binds to the Precursor miRNA 20b.
|
Gabriele Varani, Matthew D Shortridge, Yi-Ting T Sun |
| 30490 | 2019-05-07 | Chemical Shifts: 1 set |
Solution structure of Rbfox2 RRM mimetic peptide CPfox7 |
A Small Cyclic beta-Hairpin Peptide Mimics the Rbfox2 RNA Recognition Motif and Binds to the Precursor miRNA 20b.
|
Gabriele Varani, Matthew D Shortridge, Yi-Ting T Sun |
| 30487 | 2019-05-07 | Chemical Shifts: 1 set |
Solution structure of Rbfox2 RRM mimetic peptide CPfox4 |
A Small Cyclic beta-Hairpin Peptide Mimics the Rbfox2 RNA Recognition Motif and Binds to the Precursor miRNA 20b.
|
Gabriele Varani, Matthew D Shortridge, Yi-Ting T Sun |
| 30488 | 2019-05-07 | Chemical Shifts: 1 set |
Solution structure of Rbfox2 RRM mimetic peptide CPfox5 |
A Small Cyclic beta-Hairpin Peptide Mimics the Rbfox2 RNA Recognition Motif and Binds to the Precursor miRNA 20b.
|
Gabriele Varani, Matthew D Shortridge, Yi-Ting T Sun |
| 30489 | 2019-05-07 | Chemical Shifts: 1 set |
Solution structure of Rbfox2 RRM mimetic peptide CPfox6 |
A Small Cyclic beta-Hairpin Peptide Mimics the Rbfox2 RNA Recognition Motif and Binds to the Precursor miRNA 20b.
|
Gabriele Varani, Matthew D Shortridge, Yi-Ting T Sun |
| 30394 | 2018-11-13 | Chemical Shifts: 1 set |
Solution structure of a phosphate-loop protein |
Simple yet functional phosphate-loop proteins.
|
Agnes Toth-Petroczy, Alexander Goncearenco, Alon Wellner, Dan S Tawfik, David Baker, Fanindra Kumar-Deshmukh, Fan Yang, Gabriele Varani, Igor N Berezovsky, Maria Luisa L Romero Romero, Michal Sharon, Wen Yang, Yu-Ru R Lin |
| 30395 | 2018-11-13 | Chemical Shifts: 1 set |
Solution structure of a phosphate-loop protein |
Simple yet functional phosphate-loop proteins.
|
Agnes Toth-Petroczy, Alexander Goncearenco, Alon Wellner, Dan S Tawfik, David Baker, Fanindra Kumar-Deshmukh, Fan Yang, Gabriele Varani, Igor N Berezovsky, Maria Luisa L Romero Romero, Michal Sharon, Wen Yang, Yu-Ru R Lin |
| 25953 | 2016-11-17 | Chemical Shifts: 1 set |
Structure of CCHC zinc finger domain of Pcf11 |
The C-terminus of Pcf11 forms a novel zinc-finger structure that plays an essential role in mRNA 3'- end processing
|
Claire Moore, Derick Hoskinson, Fan Yang, Gabriele Varani, Peter Hsu, Susan D Lee, Weihao Xu, Wen Yang |
| 25831 | 2016-04-12 | Chemical Shifts: 2 sets |
solution structure of the complex of microRNA 20b pre-element with Rbfox RRM |
Rbfox proteins regulate microRNA biogenesis by sequence-specific binding to their precursors and target downstream Dicer
|
Fan Yang, Gabriele Varani, Javier Castellanos, Katherine Godin, Lorena Zubovic, Paolo Macchi, Tom Pavelitz, Yu Chen |
| 25826 | 2016-04-12 | Chemical Shifts: 1 set |
solution structure of microRNA 20b pre-element |
Rbfox proteins regulate microRNA biogenesis by sequence-specific binding to their precursors and target downstream Dicer
|
Fan Yang, Gabriele Varani, Javier Castellanos, Katherine Godin, Lorena Zubovic, Paolo Macchi, Tom Pavelitz, Yu Chen |
| 25785 | 2016-07-26 | Chemical Shifts: 1 set |
NMR Assignment and structure of CssA5 (middle region) of CssA thermometer from Neisseria meningitidis |
Structure and mechanism of a molecular rheostat, an RNA thermometer that modulates immune evasion by Neisseria meningitidis
|
Christoph M Tang, Edmund Loh, Gabriele Varani, Hayley Lavender, Jordan Yip, Kate S Godin, Ravi P Barnwal |
| 25784 | 2016-07-26 | Chemical Shifts: 1 set |
NMR Assignment and structure of CssA Thermometer from Neisseria meningitidis |
Structure and mechanism of a molecular rheostat, an RNA thermometer that modulates immune evasion by Neisseria meningitidis
|
Christoph M Tang, Edmund Loh, Gabriele Varani, Hayley Lavender, Jordan Yip, Kate S Godin, Ravi P Barnwal |
| 25780 | 2016-07-26 | Chemical Shifts: 1 set |
Structure of CssA4 (bottom stem) of CssA thermometer |
Structure and mechanism of a molecular rheostat, an RNA thermometer that modulates immune evasion by Neisseria meningitidis
|
Christoph M Tang, Edmund Loh, Gabriele Varani, Hayley Lavender, Jordan Yip, Kate S Godin, Ravi P Barnwal |
| 25781 | 2016-07-26 | Chemical Shifts: 1 set |
NMR Assignment and NMR Structure of CssA3 (top stem) of CssA thermometer |
Structure and mechanism of a molecular rheostat, an RNA thermometer that modulates immune evasion by Neisseria meningitidis
|
Christoph M Tang, Edmund Loh, Gabriele Varani, Hayley Lavender, Jordan Yip, Kate S Godin, Ravi P Barnwal |
| 25656 | 2015-06-23 | Chemical Shifts: 1 set |
NMR Assignments and structure of Translation initiation factor IF-1 from Burkholderia thailandensis E264. |
NMR Assignments and structure of Translation initiation factor IF-1 from Burkholderia thailandensis E264.
|
Gabriele Varani, Ravi Pratap Barnwal |
| 26505 | 2015-02-11 | Heteronuclear NOE Values: 2 sets T1 Relaxation Values: 2 sets T1rho Relaxation Values: 2 sets Order Parameters: 2 sets |
13C NMR Relaxation Studies of RNA Base and Ribose Nuclei Reveal a Complex Pattern of Motions in the RNA Binding Site for Human U1A Protein |
13C NMR Relaxation Studies of RNA Base and Ribose Nuclei Reveal a Complex Pattern of Motions in the RNA
|
Gabriele Varani, Zahra Shajani |
| 25083 | 2014-07-16 | Chemical Shifts: 1 set |
Backbone 1H, 13C, and 15N Chemical Shift Assignments and NMR structure for potential drug target from Burkholderia thailandensis E264' |
Backbone 1H, 13C, and 15N Chemical Shift Assignments and NMR structure for potential drug target from Burkholderia thailandensis E264'
|
Gabriele Varani, Ravi P Barnwal |
| 25068 | 2014-07-21 | Chemical Shifts: 1 set |
NMR Structure and 1H, 13C and 15N Chemical Shift Assignments for High mobility group protein from Plasmodium falciparum 3D7. |
NMR Structure and 1H, 13C and 15N Chemical Shift Assignments for High mobility group protein from Plasmodium falciparum 3D7.
|
Changyan Tang, Gabriele Varani, Ravi P Barnwal |
| 19703 | 2014-01-14 | Chemical Shifts: 1 set |
Backbone 1H, 13C, and 15N Chemical Shift Assignments and structure of Iron-sulfur cluster binding protein from Ehrlichia chaffeensis |
Backbone 1H, 13C, and 15N Chemical Shift Assignments and structure of Iron-sulfur cluster binding protein from Ehrlichia chaffeensis
|
Gabriele Varani, Ravi Pratap Barnwal |
| 19449 | 2013-10-08 | Chemical Shifts: 1 set |
NMR structure of a BolA-like hypothetical protein RP812 from RICKETTSIA PROWAZEKII, SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE (SSGCID) |
NMR structure of a BolA-like hypothetical protein RP812 from RICKETTSIA PROWAZEKII, SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE (SSGCID)
|
Fan Yang, Gabriele Varani, Ravi BARNWAL, Yu Chen |
| 19027 | 2013-03-12 | Chemical Shifts: 1 set |
Backbone 1H, 13C, and 15N Chemical Shift Assignments for rubredoxin type protein from Mycobacterium ulcerans |
Backbone 1H, 13C, and 15N Chemical Shift Assignments for rubredoxin type protein from Mycobacterium ulcerans
|
Gabriele Varani, Ravi P Barnwal |
| 18633 | 2013-02-14 | Chemical Shifts: 1 set |
solution structure of small molecule-influenza RNA complex, Seattle Structural Genomics Center for Infectious Disease (SSGCID) |
A novel small-molecule binds to the influenza A virus RNA promoter and inhibits viral replication.
|
Angel Bottini, Byong-Seok Choi, Gabriele Varani, Maurizio Pellecchia, Meehyein Kim, Michael F Bardaro, Mi-Kyung Lee, Ziming Zhang |
| 17962 | 2011-10-26 | Chemical Shifts: 1 set |
Solution structure of putative oxidoreductase from Ehrlichia chaffeensis. (Seattle Structural Genomics Center for Infectious Disease (SSGCID)) |
Solution structure of putative oxidoreductase from Ehrlichia chaffeensis
|
Fan Yang, Gabriele Varani, Ravi Barnwal |
| 17855 | 2011-08-31 | Chemical Shifts: 1 set |
Backbone 1H, 13C, and 15N Chemical Shift Assignments for high mobility group protein-like protein NHP1 from Babesia bovis T2Bo. Seattle Structure Genomics Center for Infectious Disease (SSGCID) |
1H and 15N Assigned Chemical Shifts for high mobility group protein-like protein NHP1 from Babesia bovis
|
Gabriele Varani, Ravi Pratap Barnwal |
| 17553 | 2011-04-11 | Chemical Shifts: 1 set |
Solution structure of acyl CoA binding protein from Babesia bovis T2Bo. Seattle Structure Genomics Center for Infectious Disease (SSGCID) |
Solution structure of acyl CoA binding protein from Babesia bovis T2Bo
|
Fan Yang, Gabriele Varani, Ravi Barnwal |
| 17408 | 2012-08-14 | Chemical Shifts: 1 set |
Chemical probe bound to HIV TAR RNA |
A small-molecule probe induces a conformation in HIV TAR RNA capable of binding drug-like fragments
|
Amy Davidson, Carmen Lau, Darren Begley, Gabriele Varani |
| 17203 | 2010-11-01 | Chemical Shifts: 1 set |
NMR structure of Acyl carrier protein from Brucella melitensis. Seattle Structure Genomics Center for Infectious Disease (SSGCID) |
NMR assignment of acyl carrier protein from Brucella melitensis.
|
Gabriele Varani, Ravi Pratap Barnwal |
| 17151 | 2010-11-01 | Chemical Shifts: 1 set |
Solution structure of peptidyl-prolyl cis-trans isomerase from Burkholderia pseudomallei complexed with 1-{[(4-methylphenyl)thio]acetyl}piperidine. Seattle Structure Genomics Center for Infectious Disease (SSGCID) |
Null
|
Gabriele Varani, Ravi Pratap Barnwal, Suxin Zheng, Thomas Leeper |
| 17150 | 2010-09-16 | Chemical Shifts: 1 set |
Solution Structure of cellobiose-specific phosphotransferase IIB component protein from Borrelia burgdorferi. Seattle Structure Genomics Center for Infectious Disease (SSGCID). |
Solution Structure of cellobiose-specific phosphotransferase IIB component protein from Borrelia burgdorferi
|
Fan Yang, Gabriele Varani, Ravi Barnwal |
| 17044 | 2010-09-24 | Chemical Shifts: 1 set |
Solution structure of Rtt103 CTD-interacting domain bound to a Ser2 phosphorylated CTD peptide |
Cooperative interaction of transcription termination factors with the RNA polymerase II C-terminal domain.
|
Anton Meinhart, Bradley M Lunde, Fan Yang, Gabriele Varani, Hannes Mutschler, Hyunsuk Suh, Minkyu Kim, Stephen Buratowski, Steve L Reichow, Thomas C Leeper |
| 16941 | 2010-08-24 | Chemical Shifts: 1 set |
Recognition of HIV TAR RNA by peptide mimetic of Tat protein |
Essential structural requirements for specific recognition of HIV TAR RNA by peptide mimetics of Tat protein.
|
Amy Davidson, Gabriele Varani, John A Robinson, Krystyna Patora-Komisarska |
| 16877 | 2010-04-29 | Chemical Shifts: 1 set |
Simultaneous recognition of HIV-1 TAR RNA bulge and loop sequences by cyclic peptide mimics of Tat protein |
Simultaneous recognition of HIV-1 TAR RNA bulge and loop sequences by cyclic peptide mimics of Tat protein.
|
Amy Davidson, Gabriele Varani, John A Robinson, Jonathan Karn, Krystyna Patora-Komisarska, Thomas C Leeper, Zafiria Athanassiou |
| 16856 | 2010-04-20 | Chemical Shifts: 1 set |
Solution Structure of acyl carrier protein from Borrelia burgdorferi, Seattle Structural Genomics Center for Infectious Disease (SSGCID) consortium |
NMR Structure of acyl carrier protein from Borrelia burgdorferi.
|
Gabriele Varani, James Moody, Ravi Pratap Barnwal, Vinayak Vittal |
| 16491 | 2009-09-29 | Chemical Shifts: 1 set |
Solution structure of peptidyl-prolyl cis-trans isomerase from Burkholderia pseudomallei complexed with Cycloheximide-N-ethylethanoate. Seattle Structure Genomics Center for Infectious Disease (SSGCID) |
Solution structure of peptidyl-prolyl cis-trans isomerase from Burkholderia pseudomallei complexed with Cycloheximide-N-ethylethanoate
|
Gabriele Varani, Suxin Zheng, Thomas Leeper |
| 16425 | 2010-07-27 | Chemical Shifts: 1 set |
Interdomain RRM packing contributes to RNA recognition in the rna15, hrp1, anchor RNA 3' processing ternary complex |
Novel Protein-Protein Contacts Facilitate mRNA 3'-Processing Signal Recognition by Rna15 and Hrp1.
|
Claire Moore, Connie Lu, Gabriele Varani, Thomas C Leeper, Xiangping Qu |
| 16412 | 2010-09-17 | Chemical Shifts: 1 set |
Solution structure of Rtt103 bound to CTD peptide |
Cooperative interaction of transcription termination factors with the RNA polymerase II C-terminal domain.
|
Anton Meinhart, Bradley M Lunde, Fan Yang, Gabriele Varani, Hannes Mutschler, Hyunsuk Suh, Minkyu Kim, Stephen Buratowski, Steve L Reichow, Thomas C Leeper |
| 16411 | 2010-09-17 | Chemical Shifts: 1 set |
Solution structure of Rtt103 CTD interacting domain |
Cooperative interaction of transcription termination factors with the RNA polymerase II C-terminal domain.
|
Anton Meinhart, Bradley M Lunde, Fan Yang, Gabriele Varani, Hannes Mutschler, Hyunsuk Suh, Minkyu Kim, Stephen Buratowski, Steve L Reichow, Thomas C Leeper |
| 16406 | 2009-07-23 | Chemical Shifts: 1 set |
Solution structure of peptidyl-prolyl cis-trans isomerase from Burkholderia pseudomallei. Seattle Structure Genomics Center for Infectious Disease (SSGCID) |
Null
|
Gabriele Varani, Suxin N Zheng, Thomas Leeper |
| 16403 | 2009-07-13 | Chemical Shifts: 1 set |
SOLUTION STRUCTURE OF GLUTAREDOXIN FROM Bartonella henselae str. Houston. Seattle Structure Genomics Center for Infectious Disease (SSGCID) |
SOLUTION STRUCTURE OF GLUTAREDOXIN FROM Bartonella henselae str. Houston. Seattle Structure Genomics Center for Infectious Disease (SSGCID)
|
Gabriele Varani, Suxin Zheng, Thomas C Leeper |
| 16264 | 2009-07-14 | Chemical Shifts: 1 set Spectral_peak_list: 3 sets |
Solution structure of Glutaredoxin from Brucella melitensis. Seattle Structure Genomics Center for Infectious Disease (SSGCID) (Target ID BrabA.00079.a) |
|
Gabriele Varani, Suxin Zheng, Thomas Leeper |
| 15958 | 2009-06-02 | Chemical Shifts: 1 set Spectral_peak_list: 3 sets |
NMR Structure of Shq1p N-terminal domain |
The Box H/ACA snoRNP Assembly Factor Shq1p is a Chaperone Protein Homologous to Hsp90 Cochaperones that Binds to the Cbf5p Enzyme.
|
Gabriele Varani, Helene Walbott, Herman van Tilbeurgh, Katherine S Godin, Nicolas Leulliot |
| 15132 | 2007-03-29 | Chemical Shifts: 1 set |
The highly cooperative folding of small, naturally occurring proteins is likely the result of natural selection. |
The highly cooperative folding of small, naturally occurring proteins is likely the result of natural selection.
|
Alexander Watters, Colin Corrent, David Baker, David Callender, Gabriele Varani, Pritilekha Deka, Tobin Sosnick |
| 6493 | 2005-11-03 | Chemical Shifts: 1 set |
Assignment of the 1H, 13C, and 15N resonances of URNdesign, a computationally redisgned RRM protein |
Letter to the Editor: 1H, 13C and 15N resonance assignments of URNdesign, a computationally redesigned RRM protein
|
Gabriele Varani, Gautam Dantas, Neil Dobson |
| 5774 | 2003-08-01 | Chemical Shifts: 1 set |
Recognition of GU-rich polyadenylation regulatory elements by human CstF-64 protein |
Recognition of GU-rich Polyadenylation Regulatory Elements by Human CstF-64 Protein
|
Gabriele Varani, Jose M Perez-Canadillas |