BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
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BMRB Entry 4170

Title: 2'-Deoxy-Isoguanosine Base Paired to Thymidine, NMR Minimized Average Structure

Authors: Robinson, H.; Gao, Y.-G.; Bauer, C.; Roberts, C.; Switzer, C.; Wang, A.

Citation: Robinson, H.; Gao, Y.-G.; Bauer, C.; Roberts, C.; Switzer, C.; Wang, A.. "2'-Deoxyisoguanosine Adopts more than one Tautomer to Base Pair with Thymidine Observed by High Resolution Crystal Structure Analysis"  Biochemistry 37, 10897-10905 (1998).

Assembly members:
DNA-duplex, polymer, 12 residues, Formula weight is not available

Natural source:   Common Name: not available   Taxonomy ID: not available   Superkingdom: not available   Kingdom: not available   Genus/species: not available not available

Experimental source:   Production method: chemical synthesis

Entity Sequences (FASTA):
DNA-duplex: CGCXAATTTGCG

Data sets:
Data typeCount
1H chemical shifts131

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1DNA-duplex-6GP-one1
2DNA-duplex-6GP-two1

Entities:

Entity 1, DNA-duplex-6GP-one 12 residues - Formula weight is not available

1   DCDGDCIGUDADADTDTDTDG
2   DCDG

Samples:

sample_one: DNA-duplex 0.77 mM

sample_conditions_one: pH: 7.0; pressure: 1 atm; temperature: 275 K

Experiments:

NameSampleSample stateSample conditions
NOESYsample_onenot availablesample_conditions_one
TOCSYsample_onenot availablesample_conditions_one

Software:

FELIX v1.1 - primary data processing

spedref - integration based on fitting 2-D lineshapes

NMR spectrometers:

  • VARIAN VXR 500 MHz

Related Database Links:

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