BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
Member of WWPDB

BMRB Entry 2217

Title: Structural characterization of a 39-residue synthetic peptide containing the two zinc binding domains from the HIV-1 p7 nucleocapsid protein by CD and NMR spectroscopy

Authors: Omichinski, James; Clore, G.; Sakaguchi, Kazuyasu; Appella, Ettore; Gronenborn, Angela

Citation: Omichinski, James; Clore, G.; Sakaguchi, Kazuyasu; Appella, Ettore; Gronenborn, Angela. "Structural characterization of a 39-residue synthetic peptide containing the two zinc binding domains from the HIV-1 p7 nucleocapsid protein by CD and NMR spectroscopy"  FEBS Lett. 292, 25-30 (1991).

Assembly members:
nucleocapsid protein, polymer, 39 residues, Formula weight is not available

Natural source:   Common Name: HIV   Taxonomy ID: 12721   Superkingdom: Virus   Kingdom: not available   Genus/species: HIV not available

Experimental source:   Production method: not available

Entity Sequences (FASTA):
nucleocapsid protein: VKCFNCGKEGHTARNCRAPR KKGCWKCGKEGHQMKDCTE

Data sets:
Data typeCount
1H chemical shifts255

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1nucleocapsid protein1

Entities:

Entity 1, nucleocapsid protein 39 residues - Formula weight is not available

1   VALLYSCYSPHEASNCYSGLYLYSGLUGLY
2   HISTHRALAARGASNCYSARGALAPROARG
3   LYSLYSGLYCYSTRPLYSCYSGLYLYSGLU
4   GLYHISGLNMETLYSASPCYSTHRGLU

Samples:

sample_one:

sample_condition_set_one: pH: 5.8 na; temperature: 288 K

Experiments:

NameSampleSample stateSample conditions
not availablesample_onenot availablesample_condition_set_one

Software:

No software information available

NMR spectrometers:

  • unknown unknown 0 MHz

Related Database Links:

BMRB 17216 25532
PDB
DBJ BAA12988 BAA12996 BAB85751 BAB85752 BAC02530
EMBL CAA77483 CAA77621 CAB58976 CAB58988 CAB98186
GB AAA44201 AAA45076 AAA76686 AAA85230 AAB05598
PIR FOVWLV
PRF 1102247B 1103299C
REF NP_057849 NP_057850 NP_579881
SP P03347 P03348 P03366 P03367 P04585