BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
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BMRB Entry 18762

Title: NMR solution structure of an N2-guanine DNA adduct derived from the potent tumorigen dibenzo[a,l]pyrene: Intercalation from the minor groove with ruptured Watson-Crick base pairing   PubMed: 23121427

Authors: Tang, Yijin; Liu, Zhi; Ding, Shuang; Lin, Chin; Cai, Yuqin; Rodriguez, Fabian; Sayer, Jane; Jerina, Donald; Amin, Shantu; Broyde, Suse; Geacintov, Nicholas

Citation: Tang, Yijin; Liu, Zhi; Ding, Shuang; Lin, Chin; Cai, Yuqin; Rodriguez, Fabian; Sayer, Jane; Jerina, Donald; Amin, Shantu; Broyde, Suse; Geacintov, Nicholas. "Nuclear Magnetic Resonance Solution Structure of an N(2)-Guanine DNA Adduct Derived from the Potent Tumorigen Dibenzo[a,l]pyrene: Intercalation from the Minor Groove with Ruptured Watson-Crick Base Pairing."  Biochemistry 51, 9751-9762 (2012).

Assembly members:
DNA_(5'-D(*CP*CP*AP*TP*CP*GP*CP*TP*AP*CP*C)-3')_, polymer, 11 residues, 3254.165 Da.
DNA_(5'-D(*GP*GP*TP*AP*GP*CP*GP*AP*TP*GP*G)-3')_, polymer, 11 residues, 3454.286 Da.
1,3-DIAMINOBENZYL PHENYLALANINE, non-polymer, 122.168 Da.

Natural source:   Common Name: not available   Taxonomy ID: not available   Superkingdom: not available   Kingdom: not available   Genus/species: not available not available

Experimental source:   Production method: chemical synthesis

Entity Sequences (FASTA):
DNA_(5'-D(*CP*CP*AP*TP*CP*GP*CP*TP*AP*CP*C)-3')_: CCATCGCTACC
DNA_(5'-D(*GP*GP*TP*AP*GP*CP*GP*AP*TP*GP*G)-3')_: GGTAGCGATGG

Data sets:
Data typeCount
1H chemical shifts154

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