BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
Member of WWPDB

BMRB Entry 7279

Title: NMR resonance assignments of the human non-chromitin architectural transcription factor HMGA1   PubMed: 17206468

Authors: Buchko, Garry; Ni, Shuisong; Reeves, Raymond; Kennedy, Michael

Citation: Buchko, Garry; Ni, Shuisong; Lourette, Natacha; Reeves, Raymond; Kennedy, Michael. "NMR resonance assignments of the human high mobility group protein HMGA1."  J. Biomol. NMR 38, 185-185 (2007).

Assembly members:
HMGA1, polymer, 107 residues, Formula weight is not available

Natural source:   Common Name: Human   Taxonomy ID: 9606   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Homo sapiens

Experimental source:   Production method: recombinant technology

Entity Sequences (FASTA):
HMGA1: MSESSSKSSQPLASKQEKDG TEKRGRGRPRKQPPVSPGTA LVGSQKEPSEVPTPKRPRGR PKGSKNKGAAKTRKTTTTPG RKPRGRPKKLEKEEEEGISQ ESSEEEQ

Data sets:
Data typeCount
13C chemical shifts344
15N chemical shifts89
1H chemical shifts251

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1HMGA11

Entities:

Entity 1, HMGA1 107 residues - Formula weight is not available

1   METSERGLUSERSERSERLYSSERSERGLN
2   PROLEUALASERLYSGLNGLULYSASPGLY
3   THRGLULYSARGGLYARGGLYARGPROARG
4   LYSGLNPROPROVALSERPROGLYTHRALA
5   LEUVALGLYSERGLNLYSGLUPROSERGLU
6   VALPROTHRPROLYSARGPROARGGLYARG
7   PROLYSGLYSERLYSASNLYSGLYALAALA
8   LYSTHRARGLYSTHRTHRTHRTHRPROGLY
9   ARGLYSPROARGGLYARGPROLYSLYSLEU
10   GLULYSGLUGLUGLUGLUGLYILESERGLN
11   GLUSERSERGLUGLUGLUGLN

Samples:

sample_1: HMGA1, [U-15N; U-13C], 2 ± 0.2 mM; potassium phosphate 20 mM; EDTA 1 mM

conditions_1: pH: 6.0; temperature: 298 K

Experiments:

NameSampleSample stateSample conditions
2D HSQCnot availablenot availablenot available
3D HNCAnot availablenot availablenot available
3D HNCOCAnot availablenot availablenot available
3D HNCOCAnot availablenot availablenot available
3D CBCA(CO)NHnot availablenot availablenot available
3D HNCACBnot availablenot availablenot available
3D HNCOnot availablenot availablenot available
3D HNNnot availablenot availablenot available
3D CCC-TOCSYnot availablenot availablenot available
3D 15N-edited NOESYnot availablenot availablenot available

Software:

No software information available

NMR spectrometers:

  • Varian Inova 900 MHz
  • Varian Inova 750 MHz
  • Varian Inova 600 MHz
  • Varian UnityPlus 500 MHz

Related Database Links:

DBJ BAE32952 BAE42398 BAE91504 BAG62962 BAJ20344
EMBL CAA33080
GB AAA35998 AAA88072 AAB00145 AAD53889 AAF06666
REF NP_001003387 NP_001020598 NP_001034445 NP_001159948 NP_001160007
SP P17095 P17096 Q6URC2 Q9QXP3