BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
Member of WWPDB

BMRB Entry 6992

Title: Three-dimensional structure of the bacterial cell wall peptidoglycan   PubMed: 16537437

Authors: Meroueh, Samy; Bencze, Krisztina; Hesek, Dusan; Lee, Mijon; Fisher, Jed; Stemmler, Timothy; Mobashery, Shahriar

Citation: Meroueh, Samy; Bencze, Krisztina; Hesek, Dusan; Lee, Mijoon; Fisher, Jed; Stemmler, Timothy; Mobashery, Shahriar. "Three-dimensional structure of the bacterial cell wall peptidoglycan"  Proc. Natl. Acad. Sci. U. S. A. 103, 4404-4409 (2006).

Assembly members:
Bacterial cell wall peptidoglycan, polymer, 16 residues, 2000 Da.

Natural source:   Common Name: Staphylococcus aureus   Taxonomy ID: 1280   Superkingdom: Bacteria   Kingdom: not available   Genus/species: Staphylococcus aureus

Experimental source:   Production method: chemical synthesis

Entity Sequences (FASTA):
Bacterial cell wall peptidoglycan: XXXXEKXXXXXXEKXX

Data sets:
Data typeCount
1H chemical shifts89
13C chemical shifts59
15N chemical shifts13

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
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Assembly:

Entity Assembly IDEntity NameEntity ID
1bacterial cell wall peptidoglycan1

Entities:

Entity 1, bacterial cell wall peptidoglycan 16 residues - 2000 Da.

1   NAGNAMDGLDALGLULYSDALDALNAGNAM
2   DGLDALGLULYSDALDAL

Samples:

sample_1: Bacterial cell wall peptidoglycan, [U-13C; U-15N], ; H2O 90%; D2O 10%

sample_2: Bacterial cell wall peptidoglycan, [U-13C; U-15N], ; D2O 100%

conditions_1: pH: 4; temperature: 298 K

Experiments:

NameSampleSample stateSample conditions
COSYsample_1not availableconditions_1
TOCSYsample_1not availableconditions_1
1H-15N HSQCsample_1not availableconditions_1
1H-13C HSQCsample_1not availableconditions_1
NOEsample_1not availableconditions_1

Software:

SPARKY, UCSF - spectral analysis

NMR spectrometers:

  • Varian INOVA 600 MHz
  • Varian INOVA 700 MHz
  • Bruker AVANCE 720 MHz

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