BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
Member of WWPDB

BMRB Entry 6473

Title: Structural and dynamic characteristics of the acid-unfolded state of hUBF HMG Box 1 provide clues for the early events in protien folding   PubMed: 15752694

Authors: Zhang, Xuecheng; Xu, Yingqi; Zhang, Jiahai; Wu, Jihui; Shi, Yunyu

Citation: Zhang, Xuecheng; Zhang, Jiahai; Li, X.; Xu, J.; Huang, H.; Chen, Q.; Wu, Jihui; Shi, Yunyu. "Compact molten globule-like state of hUBF HMG Box1 at extremely low pH"  Biochim Biophys Acta 1748, 66-73 (2005).

Assembly members:
human upstream binding factor high mobility group box 1, polymer, 99 residues, Formula weight is not available

Natural source:   Common Name: Human   Taxonomy ID: 9606   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Homo sapiens

Experimental source:   Production method: recombinant technology

Entity Sequences (FASTA):
human upstream binding factor high mobility group box 1: MKKLKKHPDFPKKPLTPYFR FFMEKRAKYAKLHPEMSNLD LTKILSKKYKELPEKKKMKY IQDFQREKQEFERNLARFRE DHPDLIQNAKKLEHHHHHH

Data sets:
Data typeCount
1H chemical shifts190
13C chemical shifts297
15N chemical shifts91

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
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Assembly:

Entity Assembly IDEntity NameEntity ID
1hUBF HMG Box 11

Entities:

Entity 1, hUBF HMG Box 1 99 residues - Formula weight is not available

1   METLYSLYSLEULYSLYSHISPROASPPHE
2   PROLYSLYSPROLEUTHRPROTYRPHEARG
3   PHEPHEMETGLULYSARGALALYSTYRALA
4   LYSLEUHISPROGLUMETSERASNLEUASP
5   LEUTHRLYSILELEUSERLYSLYSTYRLYS
6   GLULEUPROGLULYSLYSLYSMETLYSTYR
7   ILEGLNASPPHEGLNARGGLULYSGLNGLU
8   PHEGLUARGASNLEUALAARGPHEARGGLU
9   ASPHISPROASPLEUILEGLNASNALALYS
10   LYSLEUGLUHISHISHISHISHISHIS

Samples:

sample_1: human upstream binding factor high mobility group box 1, [U-13C; U-15N], 1 mM

sample_conditions_1: pH: 2.1; temperature: 303 K

Experiments:

NameSampleSample stateSample conditions

Software:

No software information available

NMR spectrometers:

  • Bruker DMX 600 MHz

Related Database Links:

PDB
EMBL CAC34632
GB AAH31423 EAW51620 KFO25262
REF XP_003362590 XP_008111485 XP_009067615 XP_009504711 XP_009968165