BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
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BMRB Entry 20124

Title: Structure and lipid interactions of an anti-atherogenic Apolipoprotein J peptide using solution NMR   PubMed: 20970404

Authors: Mishra, Vinod

Citation: Mishraa, Vinod; Palgunacharia, Mayakonda; Hudsonb, Jason; Shinc, Ronald; Keenuma, Tamara; Krishnac, N.; Anantharamaiah, G.. "Structure and lipid interactions of an anti-inflammatory and anti-atherogenic 10-residue class Glow asterisk apolipoprotein J peptide using solution NMR"  Biochim. Biophys. Acta 1808, 498-507 (2010).

Assembly members:
Apolipoprotein_J_Peptide, polymer, 10 residues, 1244 Da.

Natural source:   Common Name: not available   Taxonomy ID: not available   Superkingdom: not available   Kingdom: not available   Genus/species: not available not available

Experimental source:   Production method: recombinant technology

Entity Sequences (FASTA):
Apolipoprotein_J_Peptide: LVGRQLEEFL

Data sets:
Data typeCount
1H chemical shifts85

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
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Assembly:

Entity Assembly IDEntity NameEntity ID
1Apolipoprotein_J_Peptide1

Entities:

Entity 1, Apolipoprotein_J_Peptide 10 residues - 1244 Da.

1   LEUVALGLYARGGLNLEUGLUGLUPHELEU

Samples:

sample_1: Apolipoprotein J Peptide1 – 2 mM; H2O 95%; D2O 5%

sample_conditions_1: pH: 5.5; temperature: 310 K

Experiments:

NameSampleSample stateSample conditions
2D 1H-1H TOCSYsample_1isotropicsample_conditions_1
2D 1H-1H NOESYsample_1isotropicsample_conditions_1
2D DQF-COSYsample_1isotropicsample_conditions_1

Software:

X-PLOR, Brunger - refinement

NMR spectrometers:

  • Bruker DRX 500 MHz
  • Bruker DRX 600 MHz

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