BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
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BMRB Entry 20060

Title: Solution structure of designed peptide, YI12FF in the presence of LPS bilayer   PubMed: 19520860

Authors: Bhunia, Anirban; Bhattacharjya, Surajit

Citation: Bhunia, Anirban; Mohanram, Harini; Domadia, Prerna; Torres, Jaume; Bhattacharjya, Surajit. "Designed beta-boomerang antiendotoxic and antimicrobial peptides: structures and activities in lipopolysaccharide"  J. Biol. Chem. 284, 21991-22004 (2009).

Assembly members:
YI12FF, polymer, 12 residues, Formula weight is not available

Natural source:   Common Name: not available   Taxonomy ID: not available   Superkingdom: not available   Kingdom: not available   Genus/species: not available not available

Experimental source:   Production method: recombinant technology

Entity Sequences (FASTA):
YI12FF: YVLFKRKRFIFI

Data sets:
Data typeCount
1H chemical shifts80

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
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Assembly:

Entity Assembly IDEntity NameEntity ID
1YI12FF1

Entities:

Entity 1, YI12FF 12 residues - Formula weight is not available

1   TYRVALLEUPHELYSARGLYSARGPHEILE
2   PHEILE

Samples:

sample_1: YI12FF+LPS 0.5 ± 0.02 mM; H2O 90%; D2O 10%

sample_conditions_1: pH: 4.5; temperature: 288 K

Experiments:

NameSampleSample stateSample conditions
2D 1H-1H TOCSYsample_1isotropicsample_conditions_1
2D 1H-1H trNOESYsample_1isotropicsample_conditions_1

Software:

DYANA v1.5, Guntert, Braun and Wuthrich - refinement

NMR spectrometers:

  • Bruker DRX 600 MHz

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